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Possible input formats (tab-separated columns):
chr12  3884608 +
chr12  3884608 + lnc-PRMT8-4:1
CAGE-seq data
Each genomic feature is analyzed across all samples (sample in which the peak is most closely associated to the genomic feature is retained)
User knows in which tissue the set of genomic features are more likely to be expressed
Chromatin marks might generate large regions of enriched signal (broad peaks) or peaks of a few hundred base pairs (narrow peaks). Moreover, gapped peaks arise in regions that may be spliced.
Chromatin marks might generate large regions of enriched signal (broad peaks) or peaks of a few hundred base pairs (narrow peaks). Moreover, gapped peaks arise in regions that may be spliced.
Chromatin marks might generate large regions of enriched signal (broad peaks) or peaks of a few hundred base pairs (narrow peaks). Moreover, gapped peaks arise in regions that may be spliced.
Each genomic feature is analyzed across all samples (sample in which the peak is most closely associated to the genomic feature is retained)
User knows in which tissue the set of genomic features are more likely to be expressed
Number of random Zipper plots to compute AUZ_pval
Input is not a number!
By default, the Zipper plot is displayed in a +/- 5kb window from the TSS
Sample types with a peak as close (or closer) to the TSS than the one found in the chosen sample type